STOmics STOmics

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STOmics has been widely applied in organogenesis, embryo development, evolution, neuroscience and oncology research, and other different fields. Up to now, approximately 30 papers using Stereo-seq have been published on CellNatureScience, and other top academic journals.

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18/02/2025 DOI:10.1016/j.molp.2025.02.003

A large-scale integrated transcriptomic atlas for soybean organ development

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Molecular Plant Sample Type·root, nodule, apical meristem of stem, leaf

14/02/2025 DOI:10.1002/imt2.272

Cross-tissue multi-omics analyses reveal the gut microbiota's absence impacts organ morphology, immune homeostasis, bile acid and lipid metabolism

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iMeta Species·mouse Sample Type·intestinal microbiota

14/02/2025 DOI:10.1002/advs.202414230

Human Pituitary Organoids: Transcriptional Landscape Deciphered by scRNA-Seq and Stereo-Seq, with Insights into SOX3's Role in Pituitary Development

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Advanced science  Sample Type·human pituitary organoid

03/02/2025 DOI:10.1038/s41467-025-56501-w

Cloned airway basal progenitor cells to repair fibrotic lung through re-epithelialization

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nature communications Species·mouse Sample Type·lung

03/02/2025 DOI:10.1016/j.cels.2025.101194

Inferring cell trajectories of spatial transcriptomics via optimal transport analysis

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Cell Systems Sample Type·axolotl telencephalon and mouse midbrain

01/02/2025 DOI:10.1016/j.celrep.2025.115240

A single-cell and spatial wheat root atlas with cross-species annotations delineates conserved tissue-specific marker genes and regulators

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Cell Reports Species·wheat Sample Type·roots

31/01/2025 DOI:10.1016/j.semcdb.2025.01.002

Decoding the blueprints of embryo development with single-cell and spatial omics

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Seminars in Cell & Developmental Biology

28/01/2025 DOI:10.1038/s41421-024-00747-z

Stromal architecture and fibroblast subpopulations with opposing effects on outcomes in hepatocellular carcinoma

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cell discovery Sample Type·hepatocellular carcinoma patients

24/01/2025 DOI:10.3390/ijms26030995

Spatial Transcriptomics in Human Cardiac Tissue

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International Journal of Molecular Sciences

21/01/2025 DOI:10.1186/s12943-025-02231-y

Comprehensive single-cell atlas of colorectal neuroendocrine tumors with liver metastases: unraveling tumor microenvironment heterogeneity between primary lesions and metastases

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Molecular Cancer Sample Type·CRNELM patients