STOmics STOmics

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STOmics has been widely applied in organogenesis, embryo development, evolution, neuroscience and oncology research, and other different fields. Up to now, approximately 30 papers using Stereo-seq have been published on CellNatureScience, and other top academic journals.

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23/04/2025 DOI:10.1038/s41586-025-08880-9

Psychedelic control of neuroimmune interactions governing fear

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Nature Species·human and mouse Sample Type·brain

21/04/2025 DOI:10.1038/s41467-025-58079-9

Stereopy: modeling comparative and spatiotemporal cellular heterogeneity via multi-sample spatial transcriptomics

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Nature Communications

09/04/2025 DOI:10.1038/s41467-025-58511-0

Spatially resolved atlas of breast cancer uncovers intercellular machinery of venular niche governing lymphocyte extravasation

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Nature Communications Species·human Sample Type·30 primary breast tumors and metastatic lymph nodes across different molecular subtypes

03/04/2025 DOI:10.1016/j.ccell.2025.03.011

Spatial transcriptomics reveals tryptophan metabolism restricting maturation of intratumoral tertiary lymphoid structures

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Cancer Cell Species·human and mouse Sample Type·hepatocellular carcinoma tissues

23/03/2025 DOI:10.1016/j.neuron.2025.02.015

Single-cell spatial transcriptomic atlas of the whole mouse brain

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Neuron Species·mouse Sample Type·brain

20/03/2025 DOI:10.1038/s41591-025-03592-z

Single-cell profiling of the human endometrium in polycystic ovary syndrome

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Nature Medicine Species·human Sample Type·women with PCOS

18/02/2025 DOI:10.1016/j.molp.2025.02.003

A large-scale integrated transcriptomic atlas for soybean organ development

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Molecular Plant Sample Type·root, nodule, apical meristem of stem, leaf

14/02/2025 DOI:10.1002/imt2.272

Cross-tissue multi-omics analyses reveal the gut microbiota's absence impacts organ morphology, immune homeostasis, bile acid and lipid metabolism

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iMeta Species·mouse Sample Type·intestinal microbiota

14/02/2025 DOI:10.1002/advs.202414230

Human Pituitary Organoids: Transcriptional Landscape Deciphered by scRNA-Seq and Stereo-Seq, with Insights into SOX3's Role in Pituitary Development

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Advanced science  Sample Type·human pituitary organoid

03/02/2025 DOI:10.1038/s41467-025-56501-w

Cloned airway basal progenitor cells to repair fibrotic lung through re-epithelialization

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nature communications Species·mouse Sample Type·lung