STOmics STOmics

EN CN
STOmics Offline Software
Your research counts on us. Providing turnkey software solutions to unlock research insights.
STOmics Cloud Offline Software
STOmics> Products>STOmics Software>Offline Software
Analysis tools
System requirements
Main function
ImageStudio
64 bit Windows10
Image quality assessment, image stitching, tissue segmentation, and cell segmentation
SAW
64 bit Centos/RedHat 78/64 bit Ubuntu 20.04
Data filtering, image registration, and obtaining of spatial single-cell gene expression matrices
StereoMap
64 bit Windows10
Data visiualization and interactive display
StereoMap

ImageStudio

ImageStudio is a SpatioTemporal omics offline image processing software, mainly involving image quality assessment and image manual adjustment modules (image stitching, tissue segmentation, and cell segmentation). The image quality assessment mainly scores the images captured by the microscope in terms of image sharpness and image track lines and is used to determine whether they are suitable for downstream data analysis. The manual image adjustment module is mainly for scenarios that cannot be satisfied by
StereoMap
SAW

SAW

The Stereo-seq Analysis Workflow (SAW) integrates several Stereo-seq spatial group gene expression analysis tools that can be used to reduce and visualize the spatial expression information of sequencing data on microarrays. Spatial expression matrices are obtained that can be used for downstream analysis
SAW
StereoMap

StereoMap

StereoMap is a high-definition visual desktop software to view the results of Stereo-seq data analysis. The software is designed to visualize STOmics' SpatioTemporal omics technologies and products and allows further exploration of SpatioTemporal omics data through a variety of tools provided within the software. The GEF matrix, image RPI and IPR data, and clustering results output from the SAW process can all be displayed in StereoMap.
StereoMap
Reach out to Us
Discover the power of Stereo-seq
Contact
/body>