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STOmics has been widely applied in organogenesis, embryo development, evolution, neuroscience and oncology research, and other different fields. Up to now, approximately 30 papers using Stereo-seq have been published on Cell, Nature, Science, and other top academic journals.

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13/07/2024 DOI:10.1038/s41380-024-02659-6

Astrocytic Neuroligin-3 influences gene expression and social behavior, but is dispensable for synapse number

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Molecular Psychiatry Species·mice Sample Type·brain

04/07/2024 DOI:10.1038/s41592-024-02325-3

Systematic comparison of sequencing-based spatial transcriptomic methods

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Nature Methods Species·mouse Sample Type·a set of reference tissues

04/07/2024 DOI:10.1093/bib/bbae259

SpaNCMG: improving spatial domains identification of spatial transcriptomics using neighborhood-complementary mixed-view graph convolutional network

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Brief Bioinform

21/06/2024 DOI:10.1038/s41592-024-02316-4

Deciphering spatial domains from spatial multi-omics with SpatialGlue

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Nature Methods Species·mouse Sample Type·brain, thymus, spleen

19/06/2024 DOI:10.1038/s41586-024-07563-1

Multiscale topology classifies cells in subcellular spatial transcriptomics

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Nature Species·mouse Sample Type·kidney

09/06/2024 DOI:10.3390/biom14060674

Accurate Identification of Spatial Domain by Incorporating Global Spatial Proximity and Local Expression Proximity

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Biomolecules

08/06/2024 DOI: 10.1093/nar/gkae480

CAbiNet: joint clustering and visualization of cells and genes for single-cell transcriptomic

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Nucleic Acids Research

06/06/2024 DOI:10.1038/s41592-024-02284-9

Accurate and efficient integrative reference-informed spatial domain detection for spatial transcriptomics

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Nature methods

05/06/2024 DOI:10.1186/s12864-024-10469-x

HyperGCN: an effective deep representation learning framework for the integrative analysis of spatial transcriptomics data

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BMC Genomics

04/06/2024 DOI:10.1016/j.devcel.2024.05.016

Spatiotemporal transcriptomic landscape of rice embryonic cells during seed germination

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Developmental Cell Species·rice Sample Type·embryo
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