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STOmics has been widely applied in organogenesis, embryo development, evolution, neuroscience and oncology research, and other different fields. Up to now, approximately 30 papers using Stereo-seq have been published on Cell, Nature, Science, and other top academic journals.

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01/07/2023 DOI:10.1101/2023.06.29.546675

Applying high-resolution spatial transcriptomics to characterize the amyloid plaque cell niche in Alzheimer’s Disease

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bioRxiv

30/06/2023 DOI:10.1016/j.csbj.2023.06.020

Single-cell and spatiotemporal transcriptomic analyses reveal the effects of microorganisms on immunity and metabolism in the mouse liver

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Computational and Structural Biotechnology Journal Species·mouse Sample Type·liver

23/06/2023 DOI:10.1093/humupd/dmad017

Dissecting mammalian reproduction with spatial transcriptomics

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Human Reproduction Update

19/06/2023 DOI:10.1038/s41422-023-00831-1

An invasive zone in human liver cancer identified by Stereo-seq promotes hepatocyte–tumor cell crosstalk, local immunosuppression and tumor progression

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Cell Research Species·human Sample Type·liver

21/05/2023 DOI:10.1101/2022.12.31.522366

StereoSiTE: A framework to spatially and quantitatively profile the cellular neighborhood organized iTME

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bioRxiv

08/05/2023 DOI:10.1101/2022.11.16.516728

Analysis of spatial transcriptomics at varying resolution levels using the unified framework of SpaSEG

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bioRxiv

07/05/2023 DOI: 10.1101/2023.05.07.539389

Integrative mapping of spatial transcriptomic and amyloid pathology in Alzheimer’s disease at single-cell resolution

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BioRxiv

06/05/2023 DOI:10.1016/j.jgg.2023.04.012

Microbiota-mediated shaping of mouse spleen structure and immune function characterized by scRNA-seq and Stereo-seq

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JGG Species·mouse Sample Type·spleen

03/05/2023 DOI:10.1101/2023.05.03.539335

Spatially-resolved single-cell atlas of ascidian endostyle provides insights into the origin of vertebrate pharyngeal organs

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bioRxiv

02/05/2023 DOI:10.1101/2023.04.26.538404

Integrated analysis of spatial multi-omics with SpatialGlue

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bioRxiv
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