STOmics STOmics

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STOmics has been widely applied in organogenesis, embryo development, evolution, neuroscience and oncology research, and other different fields. Up to now, approximately 30 papers using Stereo-seq have been published on CellNatureScience, and other top academic journals.

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31/10/2023 DOI:10.1016/j.tplants.2023.10.002

Introducing single cell stereo-sequencing technology to transform the plant transcriptome landscape

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Trends in Plant Science Species·crop

31/10/2023 DOI:10.1136/jitc-2023-SITC2023.1512

1512 Single-cell resolution spatial transcriptomics detection of pathogens followed by studying the immune milieu: using virus-associated cancers from different organs as paradigm

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British medical journal Species·human Sample Type·Nasopharyngeal carcinoma samples associated with Epstein-Barr virus and hepatocellular carcinoma samples associated with human hepatitis B virus

19/10/2023 DOI:10.1038/s42256-023-00734-1

Construction of a 3D whole organism spatial atlas by joint modelling of multiple slices with deep neural networks

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Nature Machine Intelligence

18/10/2023 DOI: 10.1007/s11427-023-2467-1

The spatial transcriptomic landscape of human gingiva in health and periodontitis

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SCIENCE CHINA Life Sciences Species·human Sample Type·gingiva

17/10/2023 DOI: 10.1016/j.xcrm.2023.101231

Cancer-associated fibroblasts undergoing neoadjuvant chemotherapy suppress rectal cancer revealed by single-cell and spatial transcriptomics

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Cell Reports Medicine Species·human Sample Type·rectum

09/10/2023 DOI:10.1186/s43556-023-00144-0

Spatial transcriptomics in development and disease

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Molecular biomedicine

01/10/2023 DOI:10.1038/s12276-023-01093-y

Spatial transcriptomics in neuroscience

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Experimental and Molecular Medicine Sample Type·brain

15/09/2023 DOI:10.1007/s11427-023-2360-3

Cellular atlases of ovarian microenvironment alterations by diet and genetically-induced obesity

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SCIENCE CHINA Life Sciences Species·mouse Sample Type·Ovarian samples from wild-type female mice, high-fat diet-induced obese mice, and leptin gene knockout-induced obese mice

13/09/2023 DOI:110.1073/pnas.2310163120

Spatial transcriptomics reveals light-induced chlorenchyma cells involved in promoting shoot regeneration in tomato callus

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PNAS Species·tomato Sample Type·shoots

12/09/2023 DOI:10.7554/eLife.85873

Single-cell RNA sequencing reveals cellular and molecular heterogeneity in fibrocartilaginous enthesis formation

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Elife Species·mouse Sample Type·Rotator cuff attachment sites in early postnatal life