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STOmics has been widely applied in organogenesis, embryo development, evolution, neuroscience and oncology research, and other different fields. Up to now, approximately 30 papers using Stereo-seq have been published on Cell, Nature, Science, and other top academic journals.

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22/08/2024 DOI:10.1016/j.cell.2024.07.040

Spatiotemporal omics for biology and medicine

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Cell

12/08/2024 DOI:10.1016/j.ccell.2024.07.006

CCL19-producing fibroblasts promote tertiary lymphoid structure formation enhancing anti-tumor IgG response in colorectal cancer liver metastasis

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Cancer Cell Species·mouse Sample Type·Humanized colorectal cancer

09/08/2024 DOI:10.1186/s13059-024-03361-0

Benchmarking clustering, alignment, and integration methods for spatial transcriptomics

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Genome biology

02/08/2024 DOI:10.1186/s12864-024-10672-w

Spatial transcriptome reveals the region-specific genes and pathways regulated by Satb2 in neocortical development

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BMC Genomics Species·mouse Sample Type·brain

30/07/2024 DOI:10.1038/s41467-024-50608-2

Whole brain alignment of spatial transcriptomics between humans and mice with BrainAlign

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Nature Communications

29/07/2024 DOI:10.1038/s41467-024-50737-8

Mapping the molecular landscape of Lotus japonicus nodule organogenesis through spatiotemporal transcriptomics

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Nature Communications Species·lotus japonicus Sample Type·root nodules

29/07/2024 DOI:10.1038/s43587-024-00672-6

Maternal age enhances purifying selection on pathogenic mutations in complex I genes of mammalian mtDNA

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Nature aging Species·mouse

18/07/2024

Single-cell and spatial multiomic inference of gene regulatory networks using SCRIPro

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Bioinformatics

13/07/2024 DOI:10.1038/s41380-024-02659-6

Astrocytic Neuroligin-3 influences gene expression and social behavior, but is dispensable for synapse number

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Molecular Psychiatry Species·mice Sample Type·brain

10/07/2024 DOI:10.1016/j.tplants.2024.06.00

Unraveling plant–microbe symbioses using single-cell and spatial transcriptomics

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Trends in Plant Science
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