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STOmics Datasets

STOmics has been widely applied in organogenesis, embryo development, evolution, neuroscience and oncology research, and other different fields. Up to now, approximately 30 papers using Stereo-seq have been published on Cell, Nature, Science, and other top academic journals.

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25/05/2024 DOI:10.1093/bib/bbae250

Benchmarking mapping algorithms for cell-type annotating in mouse brain by integrating single-nucleus RNA-seq and Stereo-seq data

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Briefings in Bioinformatics Species·mouse Sample Type·brain

23/05/2024 DOI:10.1093/bib/bbae257

Multi-modal domain adaptation for revealing spatial functional landscape from spatially resolved transcriptomics

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Brief Bioinform

23/05/2024 DOI:10.1093/bib/bbae255

A multi-view graph contrastive learning framework for deciphering spatially resolved transcriptomics data

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Brief Bioinform

18/05/2024 DOI:10.24272/j.issn.2095-8137.2023.205

Spatially resolved transcriptomic profiling of placental development in dairy cow

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Zoological Research Species·dairy cow Sample Type·placenta

10/05/2024 DOI:10.1038/s41477-024-01683-2

A spatial transcriptome map of the developing maize ear

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Nature Plants Species·maize Sample Type·maize ear

24/04/2024 DOI:10.1038/s41586-024-07305-3

Emx2 underlies the development and evolution of marsupial gliding membranes

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Nature Species·marsupial Sample Type·gliding membranes

23/04/2024 DOI:10.1016/j.cell.2024.03.041

3D reconstruction of a gastrulating human embryo

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Cell Species·human Sample Type·embryo

16/04/2024 DOI:10.1038/s41588-024-01687-w

A spatiotemporal atlas of cholestatic injury and repair in mice

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Nature Genetics Species·mice Sample Type·liver

16/04/2024 DOI:10.1038/s41588-024-01709-7

A spatiotemporal atlas of mouse liver homeostasis and regeneration

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Nature Genetics Species·mouse Sample Type·liver

15/04/2024 DOI:10.1177/00220345241232317

Spatiotemporal Evolution of Developing Palate in Mice

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Journal of Dental Research Species·mice Sample Type·palate
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