STOmics STOmics

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STOmics has been widely applied in organogenesis, embryo development, evolution, neuroscience and oncology research, and other different fields. Up to now, approximately 30 papers using Stereo-seq have been published on CellNatureScience, and other top academic journals.

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23/01/2025 DOI:10.1038/s41592-024-02503-3

Mapping the topography of spatial gene expression with interpretable deep learning

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Nature Methods

21/01/2025 DOI:10.1186/s12943-025-02231-y

Comprehensive single-cell atlas of colorectal neuroendocrine tumors with liver metastases: unraveling tumor microenvironment heterogeneity between primary lesions and metastases

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Molecular Cancer Sample Type·CRNELM patients

21/01/2025 DOI:10.1016/j.xcrm.2024.101914

High cellular plasticity state of medulloblastoma local recurrence and distant dissemination

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Cell Reports Medicine Species·human Sample Type·17 treatment-naive and local or disseminated MB samples

20/01/2025 DOI:10.1186/s12864-025-11235-3

A practical guide for choosing an optimal spatial transcriptomics technology from seven major commercially available options

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BMC Genomics

15/01/2025 DOI:10.3389/fimmu.2024.1522582

Spatially resolved transcriptomics reveals gene expression characteristics in uveal melanoma

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Holistic Integrative Oncology Species·human Sample Type·two uveal melanoma samples

10/01/2025 DOI:10.1038/s41556-024-01597-3

Spatial transcriptomic characterization of a Carnegie stage 7 human embryo

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Nature Cell Biology Species·human Sample Type·embryo

09/01/2025 DOI:10.1158/2159-8290.CD-24-0605

Spatially Resolved Tumor Ecosystems and Cell States in Gastric Adenocarcinoma Progression and Evolution

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Cancer Discovery Species·human Sample Type·226 samples from 121 gastric cancer (GC) patients

08/01/2025 DOI:10.1038/s41467-024-54715-y

Stereo-seq of the prefrontal cortex in aging and Alzheimer's disease

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Nature Communications Species·human Sample Type·Six male AD cases at different neuropathological stages and six age-matched male controls

07/01/2025 DOI:10.1186/s13046-024-03238-x

Antibody-based delivery of interleukin-2 modulates the immunosuppressive tumor microenvironment and achieves cure in pancreatic ductal adenocarcinoma syngeneic mice

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Journal of Experimental & Clinical Cancer Research Species·mouse Sample Type·pancreatic ductal adenocarcinoma

31/12/2024 DOI:10.1186/s12967-024-06011-y

Spatial transcriptomics reveals unique metabolic profile and key oncogenic regulators of cervical squamous cell carcinoma

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Journal of Translational Medicine Species·human Sample Type·FFPE tumor samples from patients with cervical squamous cell carcinoma